Zynomi Clinical Data Platform
Smarter Trials. Faster Outcomes.
Zynomi is the AI-Native Clinical Data Company: a governed clinical data platform that accelerates trial design, improves data quality, and connects effortlessly to dashboards, BI tools, and regulatory pipelines — with AI agents doing the data work and humans approving every result.
Zynomi Agent Fabric (ZAF) is the platform a fleet of Zynomi agents runs on, in every department, grounded in a clinical knowledge engine built from a clinical ontology and GraphRAG, with every agent output carrying provenance and an accept/reject disposition. ZAF is being built through 2026 (the AI-native rebuild year) and is not yet generally available — see Zynomi Agent Fabric (ZAF) for the architecture.

Platform Components
The Zynomi platform brings together applications, APIs, and analytics into a unified clinical trial ecosystem:
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Zynomi CTMS — Web-based Clinical Trial Management System for study design, site management, eCRF building, and clinical data capture.
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Sublink — Mobile companion app for subject engagement, medication reminders, ePRO collection, and health diaries.
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REST APIs — 100+ API endpoints powering integrations with external systems, custom applications, and third-party tools.
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Semantic Layer — Governed metrics via Cube.dev providing consistent, trusted analytics across all data consumers.
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MCP Server — Model Context Protocol enabling agentic analytics with AI assistants like Claude, Copilot, and Cursor.
Agentic Analytics

The MCP-powered semantic layer unlocks advanced analytics possibilities including embedded analytics, ad-hoc reporting, natural language queries, multi-modal visualization, and bring-your-own-viz integration with Power BI, Tableau, Superset, or any BI tool of your choice.
Key Capabilities
Study Execution
Zynomi CTMS powers end-to-end clinical trial management:
- eCRF Designer — Metadata-driven form builder for clinical data capture
- Multi-Site Trials — Centralized management across sites, roles, and access levels
- Visit Scheduling — Protocol-driven visit calendars and reminders
- Adverse Event Tracking — Safety monitoring with CDISC-compliant structures
Subject Engagement
Sublink mobile app keeps subjects connected and compliant:
- Medication Reminders — Push notifications for dose adherence
- ePRO Collection — Patient-reported outcomes via mobile app
- Visit Notifications — Appointment reminders and check-ins
- Health Diaries — Daily symptom and activity logging
Analytics and Compliance
Analytics Lakehouse delivers governed insights and regulatory readiness:
- Semantic Layer — Governed metrics via Cube.dev for consistent analytics
- CDISC Domains — Automated generation of DM, AE, CM, VS, LB domains
- BI Integration — Connect Power BI, Tableau, Superset, or Metabase
- AI/MCP Ready — Natural language queries via Model Context Protocol
User Personas
| Role | Description | Application |
|---|---|---|
| Platform Administrator | Full system access, user and master data management | CTMS Web |
| Study Designer | Designs protocols, eCRFs, and configures clinical trials | CTMS Web |
| Principal Investigator | Oversees clinical trials at their site | CTMS Web |
| Study Coordinator | Executes studies, records subject progress | CTMS Web |
| Subject | Logs medications, views reminders, manages profile | Sublink Mobile |
For detailed role responsibilities and permissions, see User Personas and Roles.